Photoproximity Labeling from Single Catalyst Sites Allows Calibration and Increased Resolution for Carbene Labeling of Protein Partners In Vitro and on Cells.


Journal

ACS central science
ISSN: 2374-7943
Titre abrégé: ACS Cent Sci
Pays: United States
ID NLM: 101660035

Informations de publication

Date de publication:
24 Jan 2024
Historique:
received: 29 11 2023
revised: 07 12 2023
accepted: 08 12 2023
medline: 31 1 2024
pubmed: 31 1 2024
entrez: 31 1 2024
Statut: epublish

Résumé

The cell surface proteome (surfaceome) plays a pivotal role in virtually all extracellular biology, and yet we are only beginning to understand the protein complexes formed in this crowded environment. Recently, a high-resolution approach (μMap) was described that utilizes multiple iridium-photocatalysts attached to a secondary antibody, directed to a primary antibody of a protein of interest, to identify proximal neighbors by light-activated conversion of a biotin-diazirine to a highly reactive carbene followed by LC/MS (Geri, J. B.; Oakley, J. V.; Reyes-Robles, T.; Wang, T.; McCarver, S. J.; White, C. H.; Rodriguez-Rivera, F. P.; Parker, D. L.; Hett, E. C.; Fadeyi, O. O.; Oslund, R. C.; MacMillan, D. W. C.

Identifiants

pubmed: 38292613
doi: 10.1021/acscentsci.3c01473
pmc: PMC10823516
doi:

Types de publication

Journal Article

Langues

eng

Pagination

199-208

Informations de copyright

© 2023 The Authors. Published by American Chemical Society.

Déclaration de conflit d'intérêts

The authors declare no competing financial interest.

Auteurs

Thomas G Bartholow (TG)

Department of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, California 94158, United States.

Paul W W Burroughs (PWW)

Department of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, California 94158, United States.

Susanna K Elledge (SK)

Department of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, California 94158, United States.

James R Byrnes (JR)

Department of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, California 94158, United States.

Lisa L Kirkemo (LL)

Department of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, California 94158, United States.

Virginia Garda (V)

Department of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, California 94158, United States.

Kevin K Leung (KK)

Department of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, California 94158, United States.

James A Wells (JA)

Department of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, California 94158, United States.
Department of Cellular & Molecular Pharmacology, University of California San Francisco, San Francisco, California 94158, United States.

Classifications MeSH