Structure and activity of particulate methane monooxygenase arrays in methanotrophs.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
05 09 2022
Historique:
received: 10 04 2022
accepted: 16 08 2022
entrez: 5 9 2022
pubmed: 6 9 2022
medline: 9 9 2022
Statut: epublish

Résumé

Methane-oxidizing bacteria play a central role in greenhouse gas mitigation and have potential applications in biomanufacturing. Their primary metabolic enzyme, particulate methane monooxygenase (pMMO), is housed in copper-induced intracytoplasmic membranes (ICMs), of which the function and biogenesis are not known. We show by serial cryo-focused ion beam (cryoFIB) milling/scanning electron microscope (SEM) volume imaging and lamellae-based cellular cryo-electron tomography (cryoET) that these ICMs are derived from the inner cell membrane. The pMMO trimer, resolved by cryoET and subtomogram averaging to 4.8 Å in the ICM, forms higher-order hexagonal arrays in intact cells. Array formation correlates with increased enzymatic activity, highlighting the importance of studying the enzyme in its native environment. These findings also demonstrate the power of cryoET to structurally characterize native membrane enzymes in the cellular context.

Identifiants

pubmed: 36064719
doi: 10.1038/s41467-022-32752-9
pii: 10.1038/s41467-022-32752-9
pmc: PMC9445010
doi:

Substances chimiques

Minerals 0
Copper 789U1901C5
Oxygenases EC 1.13.-
methane monooxygenase EC 1.14.13.25
Methane OP0UW79H66

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

5221

Subventions

Organisme : NIGMS NIH HHS
ID : R35 GM118035
Pays : United States
Organisme : Biotechnology and Biological Sciences Research Council
ID : BB/S019553/1
Pays : United Kingdom
Organisme : Wellcome Trust
ID : 206422/Z/17/Z
Pays : United Kingdom
Organisme : Biotechnology and Biological Sciences Research Council
ID : BB/S003339/1
Pays : United Kingdom
Organisme : Medical Research Council
Pays : United Kingdom

Informations de copyright

© 2022. The Author(s).

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Auteurs

Yanan Zhu (Y)

Division of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK.

Christopher W Koo (CW)

Departments of Molecular Biosciences and of Chemistry, Northwestern University, Evanston, IL, USA.

C Keith Cassidy (CK)

Department of Biochemistry, University of Oxford, Oxford, UK.

Matthew C Spink (MC)

Diamond Light Source, Harwell Science and Innovation Campus, Didcot, UK.

Tao Ni (T)

Division of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK.

Laura C Zanetti-Domingues (LC)

Central Laser Facility, Science and Technology Facility Council, Rutherford Appleton Laboratory, Didcot, Oxfordshire, UK.

Benji Bateman (B)

Central Laser Facility, Science and Technology Facility Council, Rutherford Appleton Laboratory, Didcot, Oxfordshire, UK.

Marisa L Martin-Fernandez (ML)

Central Laser Facility, Science and Technology Facility Council, Rutherford Appleton Laboratory, Didcot, Oxfordshire, UK.

Juan Shen (J)

Division of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK.

Yuewen Sheng (Y)

Diamond Light Source, Harwell Science and Innovation Campus, Didcot, UK.

Yun Song (Y)

Diamond Light Source, Harwell Science and Innovation Campus, Didcot, UK.

Zhengyi Yang (Z)

Diamond Light Source, Harwell Science and Innovation Campus, Didcot, UK.
Imaging Centre, European Molecular Biology Laboratory, Heidelberg, Germany.

Amy C Rosenzweig (AC)

Departments of Molecular Biosciences and of Chemistry, Northwestern University, Evanston, IL, USA. amyr@northwestern.edu.

Peijun Zhang (P)

Division of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK. peijun.zhang@strubi.ox.ac.uk.
Diamond Light Source, Harwell Science and Innovation Campus, Didcot, UK. peijun.zhang@strubi.ox.ac.uk.
Chinese Academy of Medical Sciences Oxford Institute, University of Oxford, Oxford, UK. peijun.zhang@strubi.ox.ac.uk.

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Classifications MeSH