The OpenGATE ecosystem for Monte Carlo simulation in medical physics.


Journal

Physics in medicine and biology
ISSN: 1361-6560
Titre abrégé: Phys Med Biol
Pays: England
ID NLM: 0401220

Informations de publication

Date de publication:
08 09 2022
Historique:
received: 20 04 2022
accepted: 24 08 2022
pubmed: 25 8 2022
medline: 11 9 2022
entrez: 24 8 2022
Statut: epublish

Résumé

This paper reviews the ecosystem of GATE, an open-source Monte Carlo toolkit for medical physics. Based on the shoulders of Geant4, the principal modules (geometry, physics, scorers) are described with brief descriptions of some key concepts (Volume, Actors, Digitizer). The main source code repositories are detailed together with the automated compilation and tests processes (Continuous Integration). We then described how the OpenGATE collaboration managed the collaborative development of about one hundred developers during almost 20 years. The impact of GATE on medical physics and cancer research is then summarized, and examples of a few key applications are given. Finally, future development perspectives are indicated.

Identifiants

pubmed: 36001985
doi: 10.1088/1361-6560/ac8c83
doi:

Types de publication

Journal Article Review Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

© 2022 Institute of Physics and Engineering in Medicine.

Auteurs

David Sarrut (D)

Université de Lyon; CREATIS; CNRS UMR5220; Inserm U1294; INSA-Lyon; Université Lyon 1, Léon Bérard cancer center, Lyon, France.

Nicolas Arbor (N)

Université de Strasbourg, IPHC, CNRS, UMR7178, F-67037 Strasbourg, France.

Thomas Baudier (T)

Université de Lyon; CREATIS; CNRS UMR5220; Inserm U1294; INSA-Lyon; Université Lyon 1, Léon Bérard cancer center, Lyon, France.

Damian Borys (D)

Department of Systems Biology and Engineering, Silesian University of Technology, Gliwice, Poland.

Ane Etxebeste (A)

Université de Lyon; CREATIS; CNRS UMR5220; Inserm U1294; INSA-Lyon; Université Lyon 1, Léon Bérard cancer center, Lyon, France.

Hermann Fuchs (H)

MedAustron Ion Therapy Center, Wiener Neustadt, Austria.
Medical University of Vienna, Department of Radiation Oncology, Vienna, Vienna, Währinger Gürtel 18-20, A-1090 Wien, Austria.

Jan Gajewski (J)

Institute of Nuclear Physics Polish Academy of Sciences, Krakow, Poland.

Loïc Grevillot (L)

MedAustron Ion Therapy Center, Wiener Neustadt, Austria.

Sébastien Jan (S)

Université Paris-Saclay, Inserm, CNRS, CEA, Laboratoire d'Imagerie Biomédicale Multimodale (BioMaps), F-91401 Orsay, France.

George C Kagadis (GC)

3DMI Research Group, Department of Medical Physics, School of Medicine, University of Patras, Patras, Greece.

Han Gyu Kang (HG)

National Institutes for Quantum Science and Technology (QST), 4-9-1 Anagawa, Inage-ku, Chiba 263-8555, Japan.

Assen Kirov (A)

Memorial Sloan Kettering Cancer, New York, NY 10021, United States of America.

Olga Kochebina (O)

Université Paris-Saclay, Inserm, CNRS, CEA, Laboratoire d'Imagerie Biomédicale Multimodale (BioMaps), F-91401 Orsay, France.

Wojciech Krzemien (W)

High Energy Physics Division, National Centre for Nuclear Research, Otwock-Świerk, Poland.
Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, S. Lojasiewicza 11, 30-348 Krakow, Poland.
Centre for Theranostics, Jagiellonian University, Kopernika 40 St, 31 501 Krakow, Poland.

Antony Lomax (A)

Center for Proton Therapy, PSI, Switzerland.
Department of Physics, ETH Zurich, Switzerland.

Panagiotis Papadimitroulas (P)

Bioemission Technology Solutions IKE, BIOEMTECH, Athens, Greece.

Christian Pommranz (C)

Werner Siemens Imaging Center, Department of Preclinical Imaging and Radiopharmacy, Eberhard Karls University Tuebingen, Roentgenweg 13, D-72076 Tuebingen, Germany.
Institute for Astronomy and Astrophysics, Eberhard Karls University Tuebingen, Sand 1, D-72076 Tuebingen, Germany.

Emilie Roncali (E)

University of California Davis, Departments of Biomedical Engineering and Radiology, Davis, CA 95616, United States of America.

Antoni Rucinski (A)

Institute of Nuclear Physics Polish Academy of Sciences, Krakow, Poland.

Carla Winterhalter (C)

Center for Proton Therapy, PSI, Switzerland.
Department of Physics, ETH Zurich, Switzerland.

Lydia Maigne (L)

Université Clermont Auvergne, Laboratoire de Physique de Clermont, CNRS, UMR 6533, F-63178 Aubière, France.

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Classifications MeSH