Biogeographic responses and niche occupancy of microbial communities following long-term land-use change.
Biodiversity hotspots
Historical contingency
Land-use change
Microbial niche specialization
Soil bacterial co-occurrence
Spatial distance
Journal
Antonie van Leeuwenhoek
ISSN: 1572-9699
Titre abrégé: Antonie Van Leeuwenhoek
Pays: Netherlands
ID NLM: 0372625
Informations de publication
Date de publication:
Sep 2022
Sep 2022
Historique:
received:
17
01
2022
accepted:
29
06
2022
pubmed:
20
7
2022
medline:
12
8
2022
entrez:
19
7
2022
Statut:
ppublish
Résumé
Understanding the effects of forest-to-agriculture conversion on microbial diversity has been a major goal in soil ecological studies. However, linking community assembly to the ruling ecological processes at local and regional scales remains challenging. Here, we evaluated bacterial community assembly patterns and the ecological processes governing niche specialization in a gradient of geography, seasonality, and land-use change, totaling 324 soil samples, 43 habitat characteristics (abiotic factors), and 16 metabolic and co-occurrence patterns (biotic factors), in the Brazilian Atlantic Rainforest, a subtropical biome recognized as one the world's largest and most threatened hotspots of biodiversity. Pairwise beta diversities were lower in pastures than in forest and no-till soils. Pasture communities showed a predominantly neutral model, regarding stochastic processes, with moderate dispersion, leading to biotic homogenization. Most no-till and forest microbial communities followed a niche-based model, with low rates of dispersal and weak homogenizing selection, indicating niche specialization or variable selection. Historical and evolutionary contingencies, as represented by soil type, season, and dispersal limitation were the main drivers of microbial assembly and processes at the local scale, markedly correlated with the occurrence of endemic microbes. Our results indicate that the patterns of assembly and their governing processes are dependent on the niche occupancy of the taxa evaluated (generalists or specialists). They are also more correlated with historical and evolutionary contingencies and the interactions among taxa (i.e., co-occurrence patterns) than the land-use change itself.
Identifiants
pubmed: 35852752
doi: 10.1007/s10482-022-01761-5
pii: 10.1007/s10482-022-01761-5
doi:
Substances chimiques
Soil
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
1129-1150Subventions
Organisme : PRONEX-CNPq/FAPESP
ID : No. 140317/ 2014-7
Organisme : SisBiota-CNPq
ID : 563251/2010-7
Organisme : FAPESP/CNPq
ID : 2008/58114-3
Organisme : FAPESP/NSF
ID : 2014/50320-4
Informations de copyright
© 2022. The Author(s), under exclusive licence to Springer Nature Switzerland AG.
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