Genome Sequence Analysis of
CRISPR spacer-typing
Clostridium chauvoei
cgMLST
genome analysis
outbreak investigation
pangenome SNPs
strain typing
virulence factors
Journal
Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977
Informations de publication
Date de publication:
2021
2021
Historique:
received:
28
06
2021
accepted:
31
08
2021
entrez:
18
10
2021
pubmed:
19
10
2021
medline:
19
10
2021
Statut:
epublish
Résumé
Black quarter caused by
Identifiants
pubmed: 34659160
doi: 10.3389/fmicb.2021.732106
pmc: PMC8513740
doi:
Types de publication
Journal Article
Langues
eng
Pagination
732106Informations de copyright
Copyright © 2021 Thomas, Abdel-Glil, Eichhorn, Semmler, Werckenthin, Baumbach, Murmann, Bodenthin-Drauschke, Zimmermann, Schotte, Galante, Slavic, Wagner, Wieler, Neubauer and Seyboldt.
Déclaration de conflit d'intérêts
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Références
Bioinformatics. 2009 Jul 15;25(14):1754-60
pubmed: 19451168
Res Microbiol. 2015 May;166(4):384-92
pubmed: 25445013
Vet Rec. 2007 Sep 1;161(9):307-8
pubmed: 17766810
J Am Vet Med Assoc. 1950 Sep;117(882):212-4
pubmed: 15436319
Sci Rep. 2021 Mar 24;11(1):6756
pubmed: 33762628
Clin Microbiol Rev. 1990 Jan;3(1):66-98
pubmed: 2404569
Bioinformatics. 2013 Apr 15;29(8):1072-5
pubmed: 23422339
Vet Rec. 1993 Mar 13;132(11):273-5
pubmed: 8465505
Nucleic Acids Res. 2015 Feb 18;43(3):e15
pubmed: 25414349
PLoS One. 2013 May 01;8(5):e61319
pubmed: 23658690
BMC Genomics. 2009 Aug 19;10:385
pubmed: 19691844
Front Microbiol. 2017 Jun 09;8:1054
pubmed: 28649238
Genome Announc. 2013 Aug 15;1(4):
pubmed: 23950118
J Clin Microbiol. 2008 Apr;46(4):1545-7
pubmed: 18256217
Genome Biol Evol. 2016 Sep 19;8(9):2841-55
pubmed: 27576538
J Vet Diagn Invest. 2017 Sep;29(5):612-621
pubmed: 28599620
J Infect. 2012 Feb;64(2):225-7
pubmed: 21945880
Braz J Microbiol. 2020 Sep;51(3):1327-1332
pubmed: 31650466
BMC Genomics. 2015 May 16;16:392
pubmed: 25981746
Nucleic Acids Res. 2017 Jul 3;45(W1):W30-W35
pubmed: 28472413
Bioinformatics. 2014 Aug 1;30(15):2114-20
pubmed: 24695404
Res Microbiol. 2015 May;166(4):264-79
pubmed: 25283728
Nucleic Acids Res. 2008 Jun;36(10):3420-35
pubmed: 18445632
Nat Biotechnol. 2013 Apr;31(4):294-6
pubmed: 23563421
Front Microbiol. 2017 Dec 12;8:2485
pubmed: 29312194
BMC Genomics. 2016 May 17;17:356
pubmed: 27184979
Vaccine. 2012 Aug 10;30(37):5500-5
pubmed: 22749595
FEMS Microbiol Lett. 2007 Feb;267(1):1-8
pubmed: 17233672
Trends Biotechnol. 2010 Dec;28(12):611-8
pubmed: 20961641
Can Vet J. 1970 Aug;11(8):170-2
pubmed: 5527955
Nucleic Acids Res. 2019 Jul 2;47(W1):W256-W259
pubmed: 30931475
Nucleic Acids Res. 2017 Jan 4;45(D1):D353-D361
pubmed: 27899662
Biochem Biophys Res Commun. 2007 Sep 14;361(1):49-54
pubmed: 17658467
Genome Biol. 2014 Mar 03;15(3):R46
pubmed: 24580807
Evolution. 2015 Mar;69(3):643-52
pubmed: 25564727
Bioinformatics. 2012 Jun 15;28(12):1647-9
pubmed: 22543367
J Vet Med Sci. 2000 Dec;62(12):1275-81
pubmed: 11193343
Infect Immun. 2012 Dec;80(12):4061-70
pubmed: 23045475
Vet Rec. 2006 Jan 21;158(3):100-1
pubmed: 16428667
BMC Genomics. 2011 Aug 08;12:402
pubmed: 21824423
Microbiology (Reading). 2007 Jul;153(Pt 7):2363-2372
pubmed: 17600080
Mol Biol Evol. 2016 Feb;33(2):456-71
pubmed: 26516092
Nucleic Acids Res. 2019 Jul 2;47(W1):W74-W80
pubmed: 31114893
Clin Microbiol Rev. 2015 Jul;28(3):721-41
pubmed: 26085550
Vet Res. 1998 May-Aug;29(3-4):219-32
pubmed: 9689739
Anaerobe. 2020 Feb;61:102116
pubmed: 31711886
Viruses. 2018 Nov 01;10(11):
pubmed: 30388811
Genome Announc. 2016 Sep 08;4(5):
pubmed: 27609912
Vet Q. 2003 Dec;25(4):155-9
pubmed: 14714738
PLoS One. 2014 Nov 19;9(11):e112963
pubmed: 25409509
Vet Microbiol. 2017 Feb;199:1-7
pubmed: 28110774
Genome Biol. 2020 Jul 22;21(1):180
pubmed: 32698896
Bioinformatics. 2015 Sep 1;31(17):2877-8
pubmed: 25913206
New Microbes New Infect. 2015 Jun 26;7:72-85
pubmed: 26442149
Bioinformatics. 2009 Aug 15;25(16):2078-9
pubmed: 19505943
Nat Commun. 2014 Jun 13;5:4165
pubmed: 24924186
Prev Vet Med. 2017 Mar 1;138:134-138
pubmed: 28237228
Wellcome Open Res. 2018 Sep 24;3:124
pubmed: 30345391
Infect Genet Evol. 2017 Oct;54:287-298
pubmed: 28720440
Bioinformatics. 2014 May 1;30(9):1297-9
pubmed: 24420766
Bioinformatics. 2014 Jul 15;30(14):2068-9
pubmed: 24642063
J Mol Biol. 1990 Oct 5;215(3):403-10
pubmed: 2231712