Genomic Prediction for Whole Weight, Body Shape, Meat Yield, and Color Traits in the Portuguese Oyster

genetic improvement genetic parameters genomic selection high density SNP markers prediction accuracy

Journal

Frontiers in genetics
ISSN: 1664-8021
Titre abrégé: Front Genet
Pays: Switzerland
ID NLM: 101560621

Informations de publication

Date de publication:
2021
Historique:
received: 30 01 2021
accepted: 07 06 2021
entrez: 26 7 2021
pubmed: 27 7 2021
medline: 27 7 2021
Statut: epublish

Résumé

Genetic improvement for quality traits, especially color and meat yield, has been limited in aquaculture because the assessment of these traits requires that the animals be slaughtered first. Genotyping technologies do, however, provide an opportunity to improve the selection efficiency for these traits. The main purpose of this study is to assess the potential for using genomic information to improve meat yield (soft tissue weight and condition index), body shape (cup and fan ratios), color (shell and mantle), and whole weight traits at harvest in the Portuguese oyster,

Identifiants

pubmed: 34306010
doi: 10.3389/fgene.2021.661276
pmc: PMC8298027
doi:

Types de publication

Journal Article

Langues

eng

Pagination

661276

Informations de copyright

Copyright © 2021 Vu, Knibb, Gondro, Subramanian, Nguyen, Alam, Dove, Gilmour, Vu, Bhyan, Tearle, Khuong, Le and O’Connor.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Références

Proc Natl Acad Sci U S A. 1979 Oct;76(10):5269-73
pubmed: 291943
Front Genet. 2019 Jan 23;9:693
pubmed: 30728827
PLoS One. 2011 May 04;6(5):e19379
pubmed: 21573248
Nat Rev Genet. 2019 Mar;20(3):135-156
pubmed: 30514919
Genet Sel Evol. 2013 Oct 15;45:39
pubmed: 24127852
J Anim Breed Genet. 2007 Dec;124(6):323-30
pubmed: 18076469
G3 (Bethesda). 2019 Aug 8;9(8):2597-2607
pubmed: 31171566
Front Genet. 2018 Jul 18;9:253
pubmed: 30073016
Bioinformatics. 2018 Oct 1;34(19):3408-3411
pubmed: 29722792
Annu Rev Anim Biosci. 2013 Jan;1:221-37
pubmed: 25387018
Methods Mol Biol. 2012;888:67-89
pubmed: 22665276
J Dairy Sci. 2008 Nov;91(11):4414-23
pubmed: 18946147
G3 (Bethesda). 2020 Feb 6;10(2):581-590
pubmed: 31826882
J Anim Sci. 2011 Mar;89(3):630-8
pubmed: 21036937
Mol Biol Evol. 2018 Jun 1;35(6):1547-1549
pubmed: 29722887
PLoS One. 2008;3(10):e3395
pubmed: 18852893
Proc Natl Acad Sci U S A. 1973 Dec;70(12):3321-3
pubmed: 4519626
Nature. 2012 Oct 4;490(7418):49-54
pubmed: 22992520
G3 (Bethesda). 2018 Mar 28;8(4):1195-1203
pubmed: 29420190
Genomics. 2020 Mar;112(2):2021-2027
pubmed: 31765824
Anim Genet. 2020 Mar;51(2):249-257
pubmed: 31999002
Genet Sel Evol. 2017 Feb 1;49(1):17
pubmed: 28148220
Rev Aquac. 2018 Aug;10(3):670-682
pubmed: 30220910
J Dairy Sci. 2017 Jan;100(1):395-401
pubmed: 28341049
Front Genet. 2015 Mar 24;6:93
pubmed: 25852740
Genes (Basel). 2021 Feb 01;12(2):
pubmed: 33535381
Am J Hum Genet. 2011 Jan 7;88(1):76-82
pubmed: 21167468
Mar Biotechnol (NY). 2019 Dec;21(6):806-812
pubmed: 31745748
J Hered. 2002 Nov-Dec;93(6):456-8
pubmed: 12642649
Genet Res (Camb). 2009 Feb;91(1):47-60
pubmed: 19220931
Genetics. 2001 Apr;157(4):1819-29
pubmed: 11290733
Genet Sel Evol. 2019 Nov 15;51(1):64
pubmed: 31730478
Genome Biol Evol. 2018 Sep 1;10(9):2518-2534
pubmed: 30184067
PeerJ. 2019 Dec 6;7:e8213
pubmed: 31824783
Genetica. 2009 Jun;136(2):245-57
pubmed: 18704696
Front Genet. 2018 Sep 19;9:391
pubmed: 30283494

Auteurs

Sang V Vu (SV)

GeneCology Research Centre, University of the Sunshine Coast, Sippy Downs, QLD, Australia.
School of Science, Technology and Engineering, University of the Sunshine Coast, Sippy Downs, QLD, Australia.
Northern National Broodstock Center for Mariculture, Research Institute for Aquaculture Number 1, Hai Phong, Vietnam.

Wayne Knibb (W)

GeneCology Research Centre, University of the Sunshine Coast, Sippy Downs, QLD, Australia.

Cedric Gondro (C)

Department of Animal Science, College of Agriculture and Natural Resources, Michigan State University, East Lansing, MI, United States.

Sankar Subramanian (S)

GeneCology Research Centre, University of the Sunshine Coast, Sippy Downs, QLD, Australia.
School of Science, Technology and Engineering, University of the Sunshine Coast, Sippy Downs, QLD, Australia.

Ngoc T H Nguyen (NTH)

Northern National Broodstock Center for Mariculture, Research Institute for Aquaculture Number 1, Hai Phong, Vietnam.

Mobashwer Alam (M)

Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Saint Lucia, QLD, Australia.

Michael Dove (M)

NSW Department of Primary Industries, Port Stephens Fisheries Institute, Taylors Beach, NSW, Australia.

Arthur R Gilmour (AR)

Consultant, Orange, NSW, Australia.

In Van Vu (IV)

Northern National Broodstock Center for Mariculture, Research Institute for Aquaculture Number 1, Hai Phong, Vietnam.

Salma Bhyan (S)

GeneCology Research Centre, University of the Sunshine Coast, Sippy Downs, QLD, Australia.
School of Science, Technology and Engineering, University of the Sunshine Coast, Sippy Downs, QLD, Australia.

Rick Tearle (R)

School of Animal and Veterinary Science, The University of Adelaide, Adelaide, SA, Australia.

Le Duy Khuong (LD)

Faculty of Environment, Ha Long University, Uong Bi, Vietnam.

Tuan Son Le (TS)

Research Institute for Marine Fisheries, Ngo Quyen, Hai Phong, Vietnam.

Wayne O'Connor (W)

GeneCology Research Centre, University of the Sunshine Coast, Sippy Downs, QLD, Australia.
School of Science, Technology and Engineering, University of the Sunshine Coast, Sippy Downs, QLD, Australia.
NSW Department of Primary Industries, Port Stephens Fisheries Institute, Taylors Beach, NSW, Australia.

Classifications MeSH