Data-Driven Prediction of Protein Adsorption on Self-Assembled Monolayers toward Material Screening and Design.

artificial neural network biointerfaces machine leaning materials informatics protein adsorption protein resistance self-assembled monolayers water contact angles

Journal

ACS biomaterials science & engineering
ISSN: 2373-9878
Titre abrégé: ACS Biomater Sci Eng
Pays: United States
ID NLM: 101654670

Informations de publication

Date de publication:
14 09 2020
Historique:
entrez: 18 1 2021
pubmed: 19 1 2021
medline: 15 5 2021
Statut: ppublish

Résumé

We attempt to predict the water contact angle (WCA) of self-assembled monolayers (SAMs) and protein adsorption on the SAMs from the chemical structures of molecules constituting the SAMs using machine learning with an artificial neural network (ANN) model. After training the ANN with data of 145 SAMs, the ANN became capable of predicting the WCA and protein adsorption accurately. The analysis of the trained ANN quantitatively revealed the importance of each structural parameter for the WCA and protein adsorption, providing essential and quantitative information for material design. We found that the degree of importance agrees well with our general perception on the physicochemical properties of SAMs. We also present the prediction of the WCA and protein adsorption of hypothetical SAMs and discuss the possibility of our approach for the material screening and design of SAMs with desired functions. On the basis of these results, we also discuss the limitation of this approach and prospects.

Identifiants

pubmed: 33455289
doi: 10.1021/acsbiomaterials.0c01008
doi:

Substances chimiques

Proteins 0
Water 059QF0KO0R

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

4949-4956

Auteurs

Rudolf Jason Kwaria (RJ)

Department of Materials Science and Engineering, School of Materials and Chemical Technology, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, Kanagawa 226-8502, Japan.

Evan Angelo Quimada Mondarte (EAQ)

Department of Materials Science and Engineering, School of Materials and Chemical Technology, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, Kanagawa 226-8502, Japan.

Hiroyuki Tahara (H)

Department of Materials Science and Engineering, School of Materials and Chemical Technology, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, Kanagawa 226-8502, Japan.

Ryongsok Chang (R)

Department of Materials Science and Engineering, School of Materials and Chemical Technology, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, Kanagawa 226-8502, Japan.

Tomohiro Hayashi (T)

Department of Materials Science and Engineering, School of Materials and Chemical Technology, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, Kanagawa 226-8502, Japan.
Japan Science and Technology Agency-Precursory Research for Embryonic Science and Technology (JST-PRESTO), 4-1-8 Hon-cho, Kawaguchi, Saitama 332-0012, Japan.

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Classifications MeSH