Frigoriglobus tundricola gen. nov., sp. nov., a psychrotolerant cellulolytic planctomycete of the family Gemmataceae from a littoral tundra wetland.
Bacteria
Bacterial Typing Techniques
Base Composition
Cellulose
/ metabolism
Cold Temperature
DNA, Bacterial
/ chemistry
Fatty Acids
/ analysis
Genes, Bacterial
Genes, rRNA
Genome, Bacterial
Gram-Negative Aerobic Bacteria
/ classification
Lipids
/ analysis
Metabolic Networks and Pathways
/ genetics
Phylogeny
Planctomycetales
/ classification
RNA, Ribosomal, 16S
/ genetics
Tundra
Wetlands
Xylans
/ metabolism
Cellulose utilization
Frigoriglobus tundricola gen. nov., sp. nov.
Large genome
Planctomycetes
Psychrotolerance
Unlinked rRNA operon
Journal
Systematic and applied microbiology
ISSN: 1618-0984
Titre abrégé: Syst Appl Microbiol
Pays: Germany
ID NLM: 8306133
Informations de publication
Date de publication:
Sep 2020
Sep 2020
Historique:
received:
28
05
2020
revised:
20
07
2020
accepted:
24
07
2020
pubmed:
28
8
2020
medline:
19
5
2021
entrez:
28
8
2020
Statut:
ppublish
Résumé
Planctomycetes of the family Gemmataceae are characterized by large genome sizes and cosmopolitan distribution in freshwater and terrestrial environments but their ecological functions remain poorly understood. In this study, we characterized a novel representative of this family, strain PL17
Identifiants
pubmed: 32847778
pii: S0723-2020(20)30084-9
doi: 10.1016/j.syapm.2020.126129
pmc: PMC7534041
pii:
doi:
Substances chimiques
DNA, Bacterial
0
Fatty Acids
0
Lipids
0
RNA, Ribosomal, 16S
0
Xylans
0
Cellulose
9004-34-6
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
126129Informations de copyright
Copyright © 2020 The Author(s). Published by Elsevier GmbH.. All rights reserved.
Références
Nucleic Acids Res. 2005 Oct 07;33(17):5691-702
pubmed: 16214803
Appl Environ Microbiol. 2013 Nov;79(22):6874-84
pubmed: 23995937
Mol Biol (Mosk). 2009 Jul-Aug;43(4):709-21
pubmed: 19807035
Appl Environ Microbiol. 2018 Mar 19;84(7):
pubmed: 29374042
Mol Biol (Mosk). 2014 May-Jun;48(3):508-17
pubmed: 25831900
Appl Environ Microbiol. 2001 Oct;67(10):4850-7
pubmed: 11571193
Int J Syst Evol Microbiol. 2012 Feb;62(Pt 2):430-437
pubmed: 21460138
Appl Environ Microbiol. 2006 Jul;72(7):4522-31
pubmed: 16820439
Proc Natl Acad Sci U S A. 2003 Dec 23;100(26):15352-7
pubmed: 14660793
Nucleic Acids Res. 2009 Jan;37(Database issue):D169-74
pubmed: 18836194
Appl Environ Microbiol. 2011 Jul;77(14):4811-21
pubmed: 21602381
Mol Biol (Mosk). 2016 Jan-Feb;50(1):151-60
pubmed: 27028821
Front Microbiol. 2012 Jan 18;3:5
pubmed: 22279446
Antonie Van Leeuwenhoek. 1984;50(3):261-8
pubmed: 6486770
Nucleic Acids Res. 2014 Jan;42(Database issue):D490-5
pubmed: 24270786
Int J Syst Evol Microbiol. 2009 Feb;59(Pt 2):357-64
pubmed: 19196778
Appl Environ Microbiol. 2004 Sep;70(9):5094-101
pubmed: 15345387
Appl Biochem Biotechnol. 2020 Feb;190(2):448-463
pubmed: 31378843
Nat Biotechnol. 2018 Nov;36(10):996-1004
pubmed: 30148503
Syst Appl Microbiol. 2020 Jan;43(1):126050
pubmed: 31882205
Int J Syst Evol Microbiol. 2020 Feb;70(2):1240-1249
pubmed: 31800383
Appl Environ Microbiol. 2011 Jun;77(12):4147-54
pubmed: 21515715
Antonie Van Leeuwenhoek. 2018 Jun;111(6):801-809
pubmed: 29134393
PLoS Comput Biol. 2017 Jun 8;13(6):e1005595
pubmed: 28594827
BMC Evol Biol. 2012 Sep 20;12:186
pubmed: 22992189
FEMS Microbiol Ecol. 2019 Feb 1;95(2):
pubmed: 30476049
Appl Environ Microbiol. 2002 Jan;68(1):417-22
pubmed: 11772655
ISME J. 2020 Feb;14(2):597-608
pubmed: 31712737
Stand Genomic Sci. 2010 Jan 28;2(1):142-8
pubmed: 21304686
Int J Syst Evol Microbiol. 2017 Feb;67(2):218-224
pubmed: 27902209
Front Microbiol. 2012 Apr 17;3:146
pubmed: 22529844
Stand Genomic Sci. 2010 Jan 28;2(1):117-34
pubmed: 21304684
Nucleic Acids Res. 2004 Jan 02;32(1):11-6
pubmed: 14704338
Microbiology (Reading). 1998 Dec;144 ( Pt 12):3257-3266
pubmed: 9884217
J Mol Biol. 2016 Feb 22;428(4):726-731
pubmed: 26585406
Int J Syst Evol Microbiol. 2018 Jan;68(1):461-466
pubmed: 29292687
ISME J. 2017 Nov;11(11):2399-2406
pubmed: 28731467
Bioinformatics. 2014 Jul 15;30(14):2068-9
pubmed: 24642063
BMC Bioinformatics. 2009 Dec 15;10:421
pubmed: 20003500
Int J Syst Evol Microbiol. 2017 Dec;67(12):4923-4929
pubmed: 29087267
Nucleic Acids Res. 2007;35(9):3100-8
pubmed: 17452365
Syst Biol. 2010 May;59(3):307-21
pubmed: 20525638
Stand Genomic Sci. 2015 Dec 07;10:120
pubmed: 26649148