Matrix-assisted laser desorption/ionization time of flight mass spectrometry identification of Vibrio (Listonella) anguillarum isolated from sea bass and sea bream.


Journal

PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081

Informations de publication

Date de publication:
2019
Historique:
received: 15 07 2019
accepted: 01 11 2019
entrez: 19 11 2019
pubmed: 19 11 2019
medline: 24 3 2020
Statut: epublish

Résumé

Vibrio (Listonella) anguillarum is a pathogenic bacterium causing septicaemia in a wide range of marine organisms and inducing severe mortalities, thus it is crucial to conduct its accurate and rapid identification. The aim of this study was to assess MALDI-TOF MS as a method of choice for identification of clinical V. anguillarum isolates from affected marine fish. Since the method accuracy might be influenced by the type of the medium used, as well as by the incubation conditions, we tested V. anguillarum isolates grown on standard media with and without the addition of NaCl, cultured at three incubation temperatures, and at three incubation periods. The best scores were retrieved for V. anguillarum strains grown on NaCl-supplemented tryptone soy agar (TSA) at 22°C and incubated for 48h (100% identification to species level; overall score 2.232), followed by incubation at 37°C and 48h (100% to species level; score 2.192). The strains grown on non-supplemented TSA gave the best readings when incubated at 22°C for 72h (100% identification to species level; overall score 2.182), followed by incubation at 15°C for 72h (100% to species level; score 2.160). Unreliable identifications and no-identifications were growing with the incubation duration at 37°C, on both media, amounting to 88.89% for 7d incubation on supplemented TSA, and 92.60% for 7d incubation on non-supplemented TSA. The age of the cultured strains and use of media significantly impacted the mass spectra, demonstrating that for reliable identification, MALDI-TOF MS protein fingerprinting with the on-target extraction should be performed on strains grown on a NaCl-supplemented medium at temperatures between 15 and 22°C, incubated for 48-72 hours.

Identifiants

pubmed: 31738803
doi: 10.1371/journal.pone.0225343
pii: PONE-D-19-18962
pmc: PMC6860450
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0225343

Déclaration de conflit d'intérêts

The authors have declared that no competing interests exist.

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Auteurs

Snježana P Kazazić (SP)

Laboratory for Mass Spectrometry and Functional Proteomics, Rudjer Bošković Institute, Zagreb, Croatia.

Natalija Topić Popović (N)

Laboratory for Aquaculture Biotechnology, Rudjer Bošković Institute, Zagreb, Croatia.
Centre of Excellence for Marine Bioprospecting-BioProCro, Rudjer Bošković Institute, Zagreb, Croatia.

Ivančica Strunjak-Perović (I)

Laboratory for Aquaculture Biotechnology, Rudjer Bošković Institute, Zagreb, Croatia.
Centre of Excellence for Marine Bioprospecting-BioProCro, Rudjer Bošković Institute, Zagreb, Croatia.

Sanja Babić (S)

Laboratory for Aquaculture Biotechnology, Rudjer Bošković Institute, Zagreb, Croatia.
Centre of Excellence for Marine Bioprospecting-BioProCro, Rudjer Bošković Institute, Zagreb, Croatia.

Daniela Florio (D)

Department of Veterinary Medical Sciences, Alma Mater Studiorum Università di Bologna, Ozzano Emilia, Italy.

Marialetizia Fioravanti (M)

Department of Veterinary Medical Sciences, Alma Mater Studiorum Università di Bologna, Ozzano Emilia, Italy.

Krunoslav Bojanić (K)

Laboratory for Aquaculture Biotechnology, Rudjer Bošković Institute, Zagreb, Croatia.
Centre of Excellence for Marine Bioprospecting-BioProCro, Rudjer Bošković Institute, Zagreb, Croatia.

Rozelindra Čož-Rakovac (R)

Laboratory for Aquaculture Biotechnology, Rudjer Bošković Institute, Zagreb, Croatia.
Centre of Excellence for Marine Bioprospecting-BioProCro, Rudjer Bošković Institute, Zagreb, Croatia.

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Classifications MeSH