Effective Surveillance Using Multilocus Variable-Number Tandem-Repeat Analysis and Whole-Genome Sequencing for Enterohemorrhagic Escherichia coli O157.

Computer Simulation Disease Outbreaks Epidemiological Monitoring Escherichia coli Infections / epidemiology Escherichia coli O157 / genetics Genome, Bacterial Minisatellite Repeats Multilocus Sequence Typing / methods Polymorphism, Single Nucleotide Whole Genome Sequencing / methods
core genome SNP analysis core genome multilocus sequence typing enterohemorrhagic Escherichia coli multilocus variable-number tandem-repeat analysis whole-genome sequencing

Journal

Applied and environmental microbiology
ISSN: 1098-5336
Titre abrégé: Appl Environ Microbiol
Pays: United States
ID NLM: 7605801

Informations de publication

Date de publication:
01 09 2019
Historique:
received: 02 04 2019
accepted: 13 06 2019
pubmed: 23 6 2019
medline: 10 7 2020
entrez: 23 6 2019
Statut: epublish

Résumé

Due to the potential of enterohemorrhagic

Identifiants

DOI: 10.1128/AEM.00728-19 PMID: 31227555 PMC: PMC6696959
pubmed: 31227555
pii: AEM.00728-19
doi: 10.1128/AEM.00728-19
pmc: PMC6696959
pii:
doi:

Types de publication

Comparative Study Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

Copyright © 2019 American Society for Microbiology.

Références

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Auteurs

Kenichi Lee (K)

Department of Bacteriology I, National Institute of Infectious Diseases, Tokyo, Japan leek@niid.go.jp.
ORCID: 0000-0002-4765-0989

Hidemasa Izumiya (H)

Department of Bacteriology I, National Institute of Infectious Diseases, Tokyo, Japan.
ORCID: 0000-0002-9797-7402

Sunao Iyoda (S)

Department of Bacteriology I, National Institute of Infectious Diseases, Tokyo, Japan.

Makoto Ohnishi (M)

Department of Bacteriology I, National Institute of Infectious Diseases, Tokyo, Japan.

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Classifications MeSH

Recherchemedicale.com › Sciences de l'information › Méthodologies informatiques › Simulation numérique › Effective Surveillance Using Multilocus...
Recherchemedicale.com › Environnement et santé publique › Santé publique › Épidémies de maladies › Effective Surveillance Using Multilocus...
Recherchemedicale.com › Environnement et santé publique › Santé publique › Méthodes épidémiologiques › Surveillance épidémiologique › Effective Surveillance Using Multilocus...
Recherchemedicale.com › Infection › Infections bactériennes et mycoses › Infections bactériennes › Infections bactériennes à Gram négatif › Infections à Enterobacteriaceae › Infections à Escherichia coli › Effective Surveillance Using Multilocus...
Recherchemedicale.com › Bactéries › Proteobacteria › Gammaproteobacteria › Enterobacteriaceae › Escherichia › Escherichia coli › Escherichia coli producteur de Shiga-toxine › Escherichia coli entérohémorrhagique › Escherichia coli O157 › Effective Surveillance Using Multilocus...
Recherchemedicale.com › Phénomènes génétiques › Structures génétiques › Génome › Génome microbien › Génome bactérien › Effective Surveillance Using Multilocus...
Recherchemedicale.com › Phénomènes génétiques › Structures génétiques › Génome › Composants de génome › Séquences répétées en tandem › Répétitions minisatellites › Effective Surveillance Using Multilocus...
Recherchemedicale.com › Techniques d'investigation › Techniques génétiques › Analyse de séquence › Analyse de séquence d'ADN › Typage par séquençage multilocus › Effective Surveillance Using Multilocus...
Recherchemedicale.com › Phénomènes génétiques › Variation génétique › Polymorphisme génétique › Polymorphisme de nucléotide simple › Effective Surveillance Using Multilocus...
Recherchemedicale.com › Techniques d'investigation › Techniques génétiques › Analyse de séquence › Analyse de séquence d'ADN › Séquençage du génome entier › Effective Surveillance Using Multilocus...